CDS

Accession Number TCMCG007C06104
gbkey CDS
Protein Id XP_009134331.2
Location 6170399..6172279
Gene LOC103858682
GeneID 103858682
Organism Brassica rapa

Protein

Length 626aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009136083.3
Definition pentatricopeptide repeat-containing protein At4g21065 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category L
Description BRCT domain, a BRCA1 C-terminus domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10683        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03440        [VIEW IN KEGG]
map03440        [VIEW IN KEGG]
GOs GO:0000151        [VIEW IN EMBL-EBI]
GO:0000152        [VIEW IN EMBL-EBI]
GO:0000724        [VIEW IN EMBL-EBI]
GO:0000725        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010212        [VIEW IN EMBL-EBI]
GO:0010332        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0010565        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0010639        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019216        [VIEW IN EMBL-EBI]
GO:0019217        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0031056        [VIEW IN EMBL-EBI]
GO:0031057        [VIEW IN EMBL-EBI]
GO:0031058        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031400        [VIEW IN EMBL-EBI]
GO:0031401        [VIEW IN EMBL-EBI]
GO:0031436        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035065        [VIEW IN EMBL-EBI]
GO:0035066        [VIEW IN EMBL-EBI]
GO:0035067        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042127        [VIEW IN EMBL-EBI]
GO:0042304        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045717        [VIEW IN EMBL-EBI]
GO:0045787        [VIEW IN EMBL-EBI]
GO:0045833        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045922        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045944        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046890        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051055        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051129        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0062012        [VIEW IN EMBL-EBI]
GO:0062014        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070531        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071156        [VIEW IN EMBL-EBI]
GO:0071158        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071479        [VIEW IN EMBL-EBI]
GO:0071480        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090068        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901983        [VIEW IN EMBL-EBI]
GO:1901984        [VIEW IN EMBL-EBI]
GO:1901985        [VIEW IN EMBL-EBI]
GO:1902275        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1905268        [VIEW IN EMBL-EBI]
GO:1905269        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000756        [VIEW IN EMBL-EBI]
GO:2000757        [VIEW IN EMBL-EBI]
GO:2000758        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]
GO:2001251        [VIEW IN EMBL-EBI]
GO:2001252        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAATAAGGGTTCTGGAAAGTTAACATCTTTTTATATGATAAATACAACCTCCTCGATAATAGTGCAATTTGACGACAATGCCCACACGAAACAGAGCTCACAAACCTCTGTTCTGCTATTACATCCAATGTTAGACAAATGCATAACCCTCTTGCAAAGCTACGGCCTTTCATCGCTCAAGAAACTCAAACAAGTCTACGCCTTTTCAATCCGCCATGGCGTCTCGATCACCGACCCCGAGATGGGTAAACACCTCATCTTCTACCTCGTCTCTCTCCCCTCTCCACCTCCCATGTCCTACGCGCATAAGATCTTCTCCGAGATAGAGAAACCATTCAACGTATTTATCTGGAACACGTTGATCAGAGGCTACGCGGAGACTTGCGACTCCGTCTCCGCTCTTTCTCTCTTCCGCGAGATGCGAGTCTCTGGTTTGGTGGAGCCGGATACTCACACTTACCCGTTTCTTCTCAAGGCCGTGGCGAAGATGGCGGATGTTCGGTTGGGGGAGACGATTCATTCGGTTGTGATTAGAAGTGGGTTTGGTTCGTTGATATTCGCTCAGAACTCTCTGCTTCATTTGTATGGTAACTGCGGTGATGTGGTTAGTGCGTACAAGGTGTTCGATGAAATGCCTGTGAAGGATCTTGTTGCTTGGAACTCTGTGATTAATGGGTTTGCGGAGAACGGTAAACCGAACGAAGCTTTGGGGCTTTATAGTGAGATGATGGGTTCGAAGGGGATTAAGCCTGATGGGTTCACTATTGTTGGCTTGTTGTCTGCTTGTGCTAAGATCGGTGCTTTGGCGTTGGGTAAGAGAGTTCATGTCTTTATGATCAAAGTGGGTTTGACAGGAAACTTGCATTCATGCAATGTTCTCTTGGACTTCTATGCAAGATGTGGAAGAGTGGAAGAAGCCAAAACGCTTTTTAGTGAAATGGTGGAGAAGAACAGTGTCTCTTGGACTTCACTGATCGTTGGTTTAGCTGTTAATGGATTTGGAAAAGAAGCCATTGAGCTTTTCAAGGATATGGAGTCAAAGGAAGGGTTGTTACCGTGTGAGATCACCTTCGTGGGGATCTTATACGCTTGTAGCCATTGCGGGATGGTGGATGAAGGTTTTGAGTATTTCAGGAGGATGAGAGAGGTGTATAAGATTGAGCCTAGGATCGAGCATTTTGGTTGTATGGTAGATCTGTTAGCTAGAGCCGGAGAAGTGAAGAAAGCGTATGAATACATTAAGGCAATGCCAATGCACCCAAATGTTGTTATATGGAGAACATTGTTAGGAGCCTGCACTGTTCACGGTGATTCTGATTTAGCAGAGTTAGCTAGAATCAAGATCTTACAGCTAGAACCAAACCACAGCGGAGACTATGTCCTCTTATCGAATATGTATGCGTCCGAGCAGCGTTGGTCAGACGTGCAGAAGATAAGAAGTAAAATGCTAGAAGACGGTGTAAGAAAAGTTCCCGGTCACAGCTTAGTAGAAGTAGGAAACAGAGTTCATGAGTTTCTTATGGGTGATAAGTCTCATCCACAAAGCGAGCAGATATACGCCAAGCTTAAAGAGATGAGTGATAGACTGAGAGTAGAAGGTTACGTTCCGCAGATATCGAGCGTGTATGTTGATGTTGAGGAGGAAGAGAAGGAGAACGCTCTTGTTTATCACAGTGAGAAGATTGCTATTGCTTTCATGCTTATAAGTACACCGGAGAGATCACCGATTAGGGTGGTGAAGAATCTTAGAGTGTGTGCAGATTGTCATCTGGCGATTAAGCTTGTGTCTAAGGTTTATGAAAGAGAGATTGTTGTGAGAGATCGTAGCAGGTTTCACCATTTTAAAGATGGTTCTTGTTCTTGTCAAGATTACTGGTAA
Protein:  
MNKGSGKLTSFYMINTTSSIIVQFDDNAHTKQSSQTSVLLLHPMLDKCITLLQSYGLSSLKKLKQVYAFSIRHGVSITDPEMGKHLIFYLVSLPSPPPMSYAHKIFSEIEKPFNVFIWNTLIRGYAETCDSVSALSLFREMRVSGLVEPDTHTYPFLLKAVAKMADVRLGETIHSVVIRSGFGSLIFAQNSLLHLYGNCGDVVSAYKVFDEMPVKDLVAWNSVINGFAENGKPNEALGLYSEMMGSKGIKPDGFTIVGLLSACAKIGALALGKRVHVFMIKVGLTGNLHSCNVLLDFYARCGRVEEAKTLFSEMVEKNSVSWTSLIVGLAVNGFGKEAIELFKDMESKEGLLPCEITFVGILYACSHCGMVDEGFEYFRRMREVYKIEPRIEHFGCMVDLLARAGEVKKAYEYIKAMPMHPNVVIWRTLLGACTVHGDSDLAELARIKILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRSKMLEDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQSEQIYAKLKEMSDRLRVEGYVPQISSVYVDVEEEEKENALVYHSEKIAIAFMLISTPERSPIRVVKNLRVCADCHLAIKLVSKVYEREIVVRDRSRFHHFKDGSCSCQDYW